ppafm.core

class ppafm.core.SplineParameters(xs, ydys)

Bases: Structure

classmethod from_file(file_path)

rff_n

Structure/Union member

rff_xs

Structure/Union member

rff_ydys

Structure/Union member

ppafm.core.computeD3Coeffs(Rs, iZs, iZPP, df_params)

ppafm.core.deleteFF_Epointer()

ppafm.core.deleteFF_Fpointer()

ppafm.core.evalRadialFF(rs, coefs, Es=None, Fs=None, kind=1, ADamp=-1)

ppafm.core.getCoulombFF(Rs, kQQs, kind=0)

ppafm.core.getDFTD3FF(Rs, d3_coeffs)

ppafm.core.getDensityR4spline(Rs, cRAs, bNormalize=True)

ppafm.core.getGaussDensity(Rs, cRAs)

ppafm.core.getInPoints_LJ(ps, Rs, cLJs, FEs=None)

ppafm.core.getLennardJonesFF(Rs, cLJs)

ppafm.core.getMorseFF(Rs, REs, alpha=None, parameters=None)

ppafm.core.getSlaterDensity(Rs, cRAs)

ppafm.core.getVdWFF(Rs, cLJs)

ppafm.core.getVdWFF_RE(Rs, REs, kind=0, ADamp=-1.0)

ppafm.core.relaxTipStroke(rTips, rs, fs, probeStart=1, relaxAlg=1, tip_spline=None)

ppafm.core.relaxTipStrokes_omp(rTips, rs, fs, probeStart=1, relaxAlg=1, tip_spline=None)

ppafm.core.setFF(cell=None, gridF=None, gridE=None, parameters=None)

ppafm.core.setFF_Epointer(gridE)

ppafm.core.setFF_Fpointer(gridF)

ppafm.core.setFF_shape(n_, cell, parameters=None)

ppafm.core.setFIRE(finc=1.1, fdec=0.5, falpha=0.99)

ppafm.core.setGridCell(cell=None, parameters=None)

ppafm.core.setGridN(n)

ppafm.core.setRelax(maxIters=1000, convF2=0.0001, dt=0.1, damping=0.1)

ppafm.core.setTip(lRadial=None, kRadial=None, rPP0=None, kSpring=None, parameters=None)

ppafm.core.stiffnessMatrix(rTips, rPPs, which=0, ddisp=0.05, tip_spline=None)

ppafm.core.subsample_nonuniform_spline(xs, ydys, xs_, ys_=None)

ppafm.core.subsample_uniform_spline(x0, dx, ydys, xs_, ys_=None)

ppafm.core.test_eigen3x3(mat)

ppafm.core.test_force(typ, r0, dr, R, fs, spline_parameters=None)